File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/3f151274eb7fec725ff434f03510b0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s8zxuvtq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:13,587 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:14,442 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:14,621 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:15,762 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:15,833 - cnv_pipe.batch.run_model - INFO - Processing cluster 1023 with 195 probes
2026-06-08 17:41:16,211 - cnv_pipe.batch.run_model.cluster1023 - INFO - Child process started for cluster 1023 with 195 probes
2026-06-08 17:42:16,415 - cnv_pipe.batch.run_model.cluster1023 - INFO - Child process finished cluster 1023. Wrote cluster_1023_samples.csv and cluster_1023_params.csv
2026-06-08 17:42:16,417 - cnv_pipe.batch.run_model - INFO - Cluster 1023 finished in 60.58 seconds. Status: SUCCESS