cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:157000001, elapsed 0.0s, est remaining 0.4s, peak mem 114MB, user 0.1s, sys 0.3s, output queue size 4
progress 10% @chr2:72000001, elapsed 0.0s, est remaining 0.4s, peak mem 114MB, user 0.2s, sys 0.9s, output queue size 5
progress 15% @chr2:232000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.2s, sys 1.5s, output queue size 5
progress 20% @chr3:149000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.3s, sys 2.0s, output queue size 4
progress 25% @chr4:111000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.3s, sys 2.6s, output queue size 5
progress 30% @chr5:80000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.4s, sys 3.2s, output queue size 6
progress 35% @chr6:61000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 3.8s, output queue size 4
progress 40% @chr7:52000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 4.5s, output queue size 3
progress 45% @chr8:54000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.6s, sys 5.0s, output queue size 3
progress 50% @chr9:70000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.6s, sys 5.6s, output queue size 3
progress 55% @chr10:93000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 6.2s, output queue size 2
progress 60% @chr11:119000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 6.8s, output queue size 6
progress 65% @chr13:12000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 7.4s, output queue size 3
progress 70% @chr14:56000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 0.9s, sys 8.1s, output queue size 5
progress 75% @chr16:7000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 0.9s, sys 8.6s, output queue size 6
progress 80% @chr17:82000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 9.2s, output queue size 10
progress 85% @chr20:18000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 9.8s, output queue size 4
progress 90% @chr21:40000001, elapsed 0.4s, est remaining 0.0s, peak mem 138MB, user 1.4s, sys 10.2s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.4s, est remaining 0.0s, peak mem 160MB, user 1.8s, sys 10.4s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 178MB, user 3.6s, sys 10.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395364
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.438 user 5.625 sys 7.120 real
done: 1 calls 0.000 user 0.000 sys 0.008 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.007 user 0.003 sys 0.803 real
idle: 76 calls 0.018 user 0.040 sys 40.544 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 187457536 mem 4.077 user 11.519 sys 2.337 real