mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s_2_4qk1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:03,422 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:04,333 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:04,506 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:05,554 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:05,741 - cnv_pipe.batch.run_model - INFO - Processing cluster 318 with 187 probes
2026-06-08 17:39:06,133 - cnv_pipe.batch.run_model.cluster318 - INFO - Child process started for cluster 318 with 187 probes
2026-06-08 17:40:03,667 - cnv_pipe.batch.run_model.cluster318 - INFO - Child process finished cluster 318. Wrote cluster_318_samples.csv and cluster_318_params.csv
2026-06-08 17:40:03,669 - cnv_pipe.batch.run_model - INFO - Cluster 318 finished in 57.93 seconds. Status: SUCCESS