mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9br7l8rf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:42,605 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:43,467 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:43,638 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:44,590 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:44,748 - cnv_pipe.batch.run_model - INFO - Processing cluster 555 with 196 probes
2026-06-08 17:39:45,121 - cnv_pipe.batch.run_model.cluster555 - INFO - Child process started for cluster 555 with 196 probes
2026-06-08 17:40:44,293 - cnv_pipe.batch.run_model.cluster555 - INFO - Child process finished cluster 555. Wrote cluster_555_samples.csv and cluster_555_params.csv
2026-06-08 17:40:44,294 - cnv_pipe.batch.run_model - INFO - Cluster 555 finished in 59.55 seconds. Status: SUCCESS