.command.log - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr4_22420786-22421189.bed)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/e61b1ad041bf7f5357b0fbbbaadcd6/.command.log
Size: 87.4 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr4_22420786-22421189.bed)
Attempt
Content

  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/e61b1ad041bf7f5357b0fbbbaadcd6/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/e61b1ad041bf7f5357b0fbbbaadcd6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:26.801924Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:26.802711Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:26.802723Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:26.802727Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:26.802731Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX7SxF27'
[2026-06-08T17:36:26.802735Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:26.802740Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:26.802744Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:26.802747Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-08T17:36:26.802751Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:26.802755Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:26.802758Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:26.802762Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:26.802766Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:26.803413Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:26.803545Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:26.809603Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:26.810407Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:26.810691Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:26.810937Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:26.811114Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.811538Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.811629Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.811700Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.811821Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.811887Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.812130Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.812507Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.812652Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.812935Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.813340Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.813962Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.815142Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.816035Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.816253Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:26.816839Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817328Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817542Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817667Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817733Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817928Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.817998Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818111Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818181Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818294Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818361Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818478Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.818584Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819097Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819334Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819453Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819525Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819650Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.819713Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.820474Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.820783Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.821268Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.821642Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.821783Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.821849Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822026Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822093Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822210Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822276Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822389Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822454Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822571Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.822879Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823334Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823409Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823518Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823583Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823694Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823759Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823868Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.823931Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.824044Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.824110Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.824216Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.824326Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.824726Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825196Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825320Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825418Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825550Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825623Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825740Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825803Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825913Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.825978Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.826087Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.826152Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.826512Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.827016Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.828650Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829308Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829437Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829513Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829675Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829742Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829854Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.829915Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830028Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830090Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830199Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830267Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830437Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.830604Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831356Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831428Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831543Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831611Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831718Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831786Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831902Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.831967Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.848711Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.849511Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.849787Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.849971Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.850988Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.851497Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.851709Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.852594Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.852983Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.853687Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.854453Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.854687Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.855047Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.856157Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.857281Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.857669Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.858416Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.858876Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:26.859593Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:26.864634Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T17:36:26.868510Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T17:36:26.873822Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T17:36:26.877794Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T17:36:26.880547Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T17:36:26.880904Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T17:36:26.881299Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:26.883995Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:27.248123Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.249538Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.253933Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:27.615052Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.616678Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.620592Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T17:36:27.782166Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.783587Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.787855Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:27.998665Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.000037Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.004229Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T17:36:28.215052Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.216683Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.220303Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T17:36:28.382095Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.383906Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.387649Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T17:36:28.416509Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.417910Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.421560Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T17:36:28.422371Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.423659Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.426963Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T17:36:28.487883Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.489264Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.493082Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:28.854490Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.854597Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.855993Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.856643Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.860205Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T17:36:28.861546Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T17:36:28.921331Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.922756Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.925845Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:28.930738Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.931909Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.934589Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:28.996108Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.997637Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.000850Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T17:36:29.162258Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.162364Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.163618Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.164039Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.169066Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T17:36:29.170220Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:29.229302Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.230617Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.233823Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T17:36:29.545649Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.547205Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.551102Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T17:36:29.712251Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.713550Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.716948Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T17:36:29.828468Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.829869Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.833022Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T17:36:29.894237Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.895820Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.899403Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T17:36:29.928380Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.929566Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.933235Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:29.994080Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.994188Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.995425Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.995940Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.999238Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:30.000849Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T17:36:30.060449Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.060540Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.060570Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.061741Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.062461Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.064828Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.066014Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T17:36:30.069362Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T17:36:30.070708Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T17:36:30.130568Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.130668Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.130701Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.131809Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.132370Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.132917Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.137232Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:30.139257Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T17:36:30.140111Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:30.197980Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.198083Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.199104Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.199633Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.203629Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:30.204619Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T17:36:30.715895Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.717144Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.719649Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.720926Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.721458Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T17:36:30.723899Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:30.785200Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.785320Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.786440Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.786905Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.790193Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:30.791051Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T17:36:30.851284Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.851389Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.852474Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.852935Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.857322Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T17:36:31.168707Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.169786Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.173224Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T17:36:31.177972Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.179018Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.182046Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T17:36:31.211147Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.211234Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.211997Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.213915Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.216307Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T17:36:31.217222Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T17:36:31.479440Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.479550Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.480399Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.482421Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.483386Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T17:36:31.486036Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:31.515085Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.515170Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.515966Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.516372Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.519320Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T17:36:31.520941Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T17:36:31.532574Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.533320Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.536360Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:31.565305Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.566238Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.568261Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.569129Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.569483Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:31.571919Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:31.585111Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.585914Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.589407Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T17:36:31.650200Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.650980Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.654615Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T17:36:31.974173Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T17:36:32.016344Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.017100Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.020530Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T17:36:32.081512Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.082305Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.086247Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T17:36:32.297445Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.298261Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.302087Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:32.413203Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.413986Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.417503Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:32.478395Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.478485Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.479131Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.479487Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.482774Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:32.483995Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:32.543839Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.544481Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.547390Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T17:36:32.576420Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.577057Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.579745Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T17:36:32.641384Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.641469Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.642071Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.642539Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.645766Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T17:36:32.647017Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T17:36:32.674818Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.675520Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.679514Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T17:36:32.679721Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.679765Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.680324Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.681018Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.684571Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:32.685344Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T17:36:32.745550Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.745624Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.746193Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.746621Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.749897Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T17:36:32.751609Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:32.811162Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.811793Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.815201Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T17:36:32.876146Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.876216Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.876794Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.877207Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.880443Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T17:36:32.881406Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T17:36:32.941838Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.941915Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.942469Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.943016Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.946382Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T17:36:32.947284Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T17:36:32.977172Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.978012Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.978286Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.980299Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.980827Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T17:36:32.983626Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T17:36:33.013001Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.013080Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.013108Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.013618Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.013946Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.014300Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.018051Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:33.019542Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:33.020690Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T17:36:33.079102Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.079172Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.079684Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.080093Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.083370Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T17:36:33.084374Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:33.112224Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.112726Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.115448Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:33.177246Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.178050Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.181025Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:33.242346Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.306764Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.307497Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.310876Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:33.371879Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.536171Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.536269Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.536731Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.537072Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.540191Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:33.541339Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T17:36:33.601392Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.601467Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.815801Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.816306Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.819226Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T17:36:33.848309Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.962845Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.963321Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.966712Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T17:36:34.027482Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.141702Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.142202Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.145337Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T17:36:34.206455Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.370727Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.371184Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.373998Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:34.435312Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.435662Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.435809Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.436110Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.436364Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.441991Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:34.442249Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:34.442817Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:34.468384Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.468469Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.468497Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.468703Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.469029Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.471879Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:34.497337Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:34.501192Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.501263Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.501456Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.504024Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:34.533332Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:37.455153Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:45.691105Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:45.691105Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] 
[2026-06-08T17:36:45.691105Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:45.691173Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] 
[2026-06-08T17:36:45.691181Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:45.691189Z] [nf-59e61b1ad041bf7f5357b0fbbbaadcd6-64f76-58g5r] [671_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec