File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/d115196035326ea7a2a15ea2c5c5ac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-15m5di8b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:17,632 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:18,529 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:18,712 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:19,736 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:19,912 - cnv_pipe.batch.run_model - INFO - Processing cluster 404 with 148 probes
2026-06-08 17:39:20,290 - cnv_pipe.batch.run_model.cluster404 - INFO - Child process started for cluster 404 with 148 probes
2026-06-08 17:40:06,737 - cnv_pipe.batch.run_model.cluster404 - INFO - Child process finished cluster 404. Wrote cluster_404_samples.csv and cluster_404_params.csv
2026-06-08 17:40:06,738 - cnv_pipe.batch.run_model - INFO - Cluster 404 finished in 46.83 seconds. Status: SUCCESS