Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/d5e715958a1374c35efc634b18ea3b/negative_somatic_control_1.snv_indel.phased.vep.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/177fbf7fbce32d863106c377a7b828/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/177fbf7fbce32d863106c377a7b828/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 144 variants, labeled 0 as HOTSPOT