File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/7f99b92a235703c20a67043f5e6172/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ql_6nzci because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:42:03,634 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:42:04,527 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:42:04,704 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:42:05,679 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:42:05,857 - cnv_pipe.batch.run_model - INFO - Processing cluster 1392 with 195 probes
2026-06-08 17:42:06,236 - cnv_pipe.batch.run_model.cluster1392 - INFO - Child process started for cluster 1392 with 195 probes
2026-06-08 17:43:06,336 - cnv_pipe.batch.run_model.cluster1392 - INFO - Child process finished cluster 1392. Wrote cluster_1392_samples.csv and cluster_1392_params.csv
2026-06-08 17:43:06,338 - cnv_pipe.batch.run_model - INFO - Cluster 1392 finished in 60.48 seconds. Status: SUCCESS