File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/e441309a71424b45bfc69d13201550/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wbi_ft4u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:55,373 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:56,222 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:56,397 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:57,459 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:57,641 - cnv_pipe.batch.run_model - INFO - Processing cluster 1344 with 173 probes
2026-06-08 17:41:58,039 - cnv_pipe.batch.run_model.cluster1344 - INFO - Child process started for cluster 1344 with 173 probes
2026-06-08 17:42:51,556 - cnv_pipe.batch.run_model.cluster1344 - INFO - Child process finished cluster 1344. Wrote cluster_1344_samples.csv and cluster_1344_params.csv
2026-06-08 17:42:51,558 - cnv_pipe.batch.run_model - INFO - Cluster 1344 finished in 53.92 seconds. Status: SUCCESS