mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tfd6viem because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:38:20,768 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:38:21,623 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:38:21,797 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:38:22,801 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:38:22,959 - cnv_pipe.batch.run_model - INFO - Processing cluster 37 with 197 probes
2026-06-08 17:38:23,339 - cnv_pipe.batch.run_model.cluster37 - INFO - Child process started for cluster 37 with 197 probes
2026-06-08 17:39:25,121 - cnv_pipe.batch.run_model.cluster37 - INFO - Child process finished cluster 37. Wrote cluster_37_samples.csv and cluster_37_params.csv
2026-06-08 17:39:25,123 - cnv_pipe.batch.run_model - INFO - Cluster 37 finished in 62.16 seconds. Status: SUCCESS