File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/19be1ac3c07dec2a0f2bfdbdf5b84b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pj0rf2co because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:49,730 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:50,643 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:50,828 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:51,885 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:52,054 - cnv_pipe.batch.run_model - INFO - Processing cluster 1215 with 183 probes
2026-06-08 17:41:52,437 - cnv_pipe.batch.run_model.cluster1215 - INFO - Child process started for cluster 1215 with 183 probes
2026-06-08 17:42:49,081 - cnv_pipe.batch.run_model.cluster1215 - INFO - Child process finished cluster 1215. Wrote cluster_1215_samples.csv and cluster_1215_params.csv
2026-06-08 17:42:49,082 - cnv_pipe.batch.run_model - INFO - Cluster 1215 finished in 57.03 seconds. Status: SUCCESS