File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/7f0e72942f9a7d6ebc04a79502660c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h2tfzqzc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:20,071 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:21,028 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:21,222 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:22,317 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:22,476 - cnv_pipe.batch.run_model - INFO - Processing cluster 772 with 195 probes
2026-06-08 17:40:22,924 - cnv_pipe.batch.run_model.cluster772 - INFO - Child process started for cluster 772 with 195 probes
2026-06-08 17:41:32,014 - cnv_pipe.batch.run_model.cluster772 - INFO - Child process finished cluster 772. Wrote cluster_772_samples.csv and cluster_772_params.csv
2026-06-08 17:41:32,015 - cnv_pipe.batch.run_model - INFO - Cluster 772 finished in 69.54 seconds. Status: SUCCESS