File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/8e283709938aa17f6baa576a8a859b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-__aquth4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:11,192 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:12,151 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:12,344 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:13,376 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:13,548 - cnv_pipe.batch.run_model - INFO - Processing cluster 720 with 178 probes
2026-06-08 17:40:13,999 - cnv_pipe.batch.run_model.cluster720 - INFO - Child process started for cluster 720 with 178 probes
2026-06-08 17:41:15,391 - cnv_pipe.batch.run_model.cluster720 - INFO - Child process finished cluster 720. Wrote cluster_720_samples.csv and cluster_720_params.csv
2026-06-08 17:41:15,392 - cnv_pipe.batch.run_model - INFO - Cluster 720 finished in 61.84 seconds. Status: SUCCESS