Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/18f7a401fcc6ed6f49d24f0a3a9dd5/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/a95586b1b08a697566ea24e2f6d852/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/a95586b1b08a697566ea24e2f6d852/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/18f7a401fcc6ed6f49d24f0a3a9dd5/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:22.078663Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:22.079818Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:22.079849Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:22.079856Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:22.079862Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXNTMCuv'
[2026-06-08T17:36:22.079867Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:22.079873Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:22.079878Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:22.079881Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-08T17:36:22.079886Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:22.079890Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:22.079894Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:22.079898Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:22.079903Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:22.080906Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:22.080971Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:22.087251Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:22.088009Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:22.088647Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:22.089107Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:22.089315Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.089980Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.090522Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.090914Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.091005Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.091165Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.091284Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.091753Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.092019Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.092217Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.092336Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.094639Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.094953Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.095185Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:22.095571Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.095668Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.095785Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.095852Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.095967Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096033Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096295Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096370Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096478Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096542Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.096770Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097081Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097200Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097266Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097382Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097449Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097553Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097624Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097757Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097819Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097927Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.097995Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098266Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098611Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098731Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098801Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098909Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098973Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099092Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099162Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099270Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099332Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099449Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099574Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099695Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099889Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.100571Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.100994Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101106Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101172Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101284Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101345Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101458Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101524Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101633Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101697Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101811Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101873Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.101985Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.102059Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.102495Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.102980Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.103164Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.103245Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.103938Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.104129Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.104711Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.104784Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.104893Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.104962Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.106782Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.107689Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.107938Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108025Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108157Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108229Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108350Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108422Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.108848Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.109570Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.109788Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.109878Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.110101Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.110183Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.110338Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111079Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111225Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111292Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111400Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111463Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111574Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111637Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111749Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.111813Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.128377Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.128811Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.128997Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.129280Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.129829Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.130720Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.130944Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.131095Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.131179Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.131553Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.132022Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.132120Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.132878Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.132977Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:22.133582Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:22.133857Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.134838Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.136280Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.137463Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.141487Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:22.145078Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:22.149928Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:22.150400Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:22.159028Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:22.163038Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:22.163375Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:22.163510Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:22.273255Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.273380Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.273407Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.273428Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.274481Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.274779Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.275532Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.275942Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.281058Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:22.282658Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:22.284376Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:22.286835Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:22.392174Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.393314Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.397937Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:22.859191Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.860341Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.864092Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:23.125648Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.126911Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.131281Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:23.192071Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.192155Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.193022Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.193377Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.197631Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:23.198801Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:23.258556Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.259661Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.262992Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:23.424642Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.425758Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.429193Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:23.540456Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.541553Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.544937Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:23.606281Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.607381Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.610798Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:23.671971Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.672998Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.676404Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:23.737591Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.738680Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.742108Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:23.803180Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.804285Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.807712Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:24.069302Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.070386Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.073806Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:24.134861Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.134975Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.135951Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.136306Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.140537Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:24.142218Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:24.201433Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.202495Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.205979Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:24.267056Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.268114Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.271452Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:24.533579Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.534654Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.538460Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:24.649658Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.650828Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.654253Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:24.717127Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.718146Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.721580Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:24.832872Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.833936Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.838233Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:24.898572Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.899535Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.902822Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:24.964153Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.965143Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.968829Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:25.230369Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.231367Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.234807Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:25.247845Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.248778Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.251930Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:25.313398Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.314418Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.317650Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:25.879989Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.880091Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.881011Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.881708Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.885391Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:25.886557Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:25.948260Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.948377Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.949263Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.949887Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.953339Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:25.954732Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:26.016346Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.017316Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.020900Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:26.082327Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.083283Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.086651Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:26.147763Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.148781Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.152173Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:26.213367Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.214998Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.215307Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.218224Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.218610Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:26.220873Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:26.282563Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.283445Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.286383Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:26.347825Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.348738Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.352874Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:26.413252Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.414169Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.417580Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:26.478587Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.478698Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.479474Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.480135Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.483351Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:26.484445Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:26.546380Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.546483Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.547247Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.547915Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.551191Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:26.552266Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:26.612538Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.613372Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.616907Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:27.229546Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.230302Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.233418Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:27.294665Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.295832Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.296217Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.298609Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.299108Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:27.301628Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:27.331151Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.331845Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.334415Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.334804Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:27.335712Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.336013Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.337032Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.340157Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:27.401254Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.402025Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.405771Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:27.466897Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.467706Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.471061Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:27.532527Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.533298Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.536680Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:27.549487Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.550161Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.553038Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:27.614474Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.614588Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.615251Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.615573Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.618879Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:27.620248Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:27.680153Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.680229Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.680873Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.682837Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.685411Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:27.686823Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:27.747819Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.747920Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.748600Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.749214Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.752715Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:27.753946Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:27.815554Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.815637Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.816243Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.816858Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.820491Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:27.821729Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:27.881551Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.882218Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.885597Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:28.097173Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.097842Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.100957Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:28.362814Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.363493Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.366694Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:28.427745Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.428352Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.431689Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:28.432295Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.432839Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.435182Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:28.498053Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.498133Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.498679Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.499272Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.501887Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:28.503032Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:28.533887Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.534792Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.535138Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.537496Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.537951Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:28.541363Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:28.602032Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.602116Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.602679Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.603467Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.607018Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:28.608022Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:28.668461Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.668553Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.669080Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.669687Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.672834Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:28.673966Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:28.735736Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.735823Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.736387Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.737033Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.740935Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:28.785433Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:28.802443Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.802536Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.803049Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.803297Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.806469Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:28.807571Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:28.867511Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.867595Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.868069Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.870829Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:28.932084Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.947977Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.948445Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.951739Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:29.013095Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.077161Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.077621Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.080308Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:29.110858Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.256829Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:29.275082Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.275158Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.275558Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.277192Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.278948Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:29.279876Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:29.310737Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.310809Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.675438Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.675858Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.678536Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:29.740161Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.458225Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.458717Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.461396Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:36.522936Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.523219Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.523347Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.523960Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.524684Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.527675Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:36.528303Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:36.530849Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:36.558523Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.558588Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.558611Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.558800Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.559410Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.562047Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:36.563009Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:36.592751Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.592825Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.593012Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:36.595535Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:36.625174Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:41.098054Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:55.199971Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:55.199971Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] 
[2026-06-08T17:36:55.199971Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:55.200037Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] 
[2026-06-08T17:36:55.200045Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:55.200052Z] [nf-2718f7a401fcc6ed6f49d24f0a3a9dd5-5a089-n6xs6] [622_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec