File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/74d0c05f531719236f86a3f36f93d7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q4das6sj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:23,196 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:24,065 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:24,242 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:25,293 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:25,477 - cnv_pipe.batch.run_model - INFO - Processing cluster 435 with 193 probes
2026-06-08 17:39:25,866 - cnv_pipe.batch.run_model.cluster435 - INFO - Child process started for cluster 435 with 193 probes
2026-06-08 17:40:26,086 - cnv_pipe.batch.run_model.cluster435 - INFO - Child process finished cluster 435. Wrote cluster_435_samples.csv and cluster_435_params.csv
2026-06-08 17:40:26,088 - cnv_pipe.batch.run_model - INFO - Cluster 435 finished in 60.61 seconds. Status: SUCCESS