File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/081aa1cc448760802d0204083c4592/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z_r9uyxo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:42:12,127 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:42:12,993 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:42:13,169 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:42:14,187 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:42:14,382 - cnv_pipe.batch.run_model - INFO - Processing cluster 1287 with 155 probes
2026-06-08 17:42:14,759 - cnv_pipe.batch.run_model.cluster1287 - INFO - Child process started for cluster 1287 with 155 probes
2026-06-08 17:43:04,937 - cnv_pipe.batch.run_model.cluster1287 - INFO - Child process finished cluster 1287. Wrote cluster_1287_samples.csv and cluster_1287_params.csv
2026-06-08 17:43:04,938 - cnv_pipe.batch.run_model - INFO - Cluster 1287 finished in 50.56 seconds. Status: SUCCESS