File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/7db4dc850960d3a1c4f38b9b58a569/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8jpd2h74 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:19,623 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:20,484 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:20,662 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:21,673 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:21,855 - cnv_pipe.batch.run_model - INFO - Processing cluster 417 with 191 probes
2026-06-08 17:39:22,238 - cnv_pipe.batch.run_model.cluster417 - INFO - Child process started for cluster 417 with 191 probes
2026-06-08 17:40:21,801 - cnv_pipe.batch.run_model.cluster417 - INFO - Child process finished cluster 417. Wrote cluster_417_samples.csv and cluster_417_params.csv
2026-06-08 17:40:21,803 - cnv_pipe.batch.run_model - INFO - Cluster 417 finished in 59.95 seconds. Status: SUCCESS