Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/38c348b68eccdbc2bea9cc80249b41/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/38c348b68eccdbc2bea9cc80249b41/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:25.111874Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:25.112594Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:25.112607Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:25.112611Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:25.112616Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXVeHU5T'
[2026-06-08T17:36:25.112620Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:25.112625Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:25.112629Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:25.112632Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-08T17:36:25.112636Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:25.112640Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:25.112644Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:25.112655Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:25.112669Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:25.113614Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:25.113679Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:25.119586Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:25.120282Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:25.120587Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:25.120807Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:25.120967Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121400Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121494Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121565Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121681Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121747Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.121888Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.122038Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.122340Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.122670Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.122789Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.123472Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.124010Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.124286Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.126057Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.126877Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:25.127085Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.127449Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.127574Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.127642Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.127844Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.127914Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128025Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128093Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128204Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128266Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128385Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128535Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.128919Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129295Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129419Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129524Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129659Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129723Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129836Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.129903Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.130021Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.130089Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.130203Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.130303Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.130821Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.131252Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.131668Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132003Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132116Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132182Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132295Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132421Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132561Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132628Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132738Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132804Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.132933Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.133086Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.133876Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.133943Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134059Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134143Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134250Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134353Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134468Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134531Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134645Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134710Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.134850Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.135186Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.135747Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.135814Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.136384Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.136450Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.136560Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.136664Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.136961Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.137560Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.139399Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140099Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140234Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140306Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140422Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140486Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140600Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140674Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140793Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140871Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.140990Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.141078Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.141678Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142172Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142296Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142363Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142476Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142545Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142651Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142720Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142837Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.142900Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.143016Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.143078Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.160784Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.161314Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.161589Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.161759Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.162039Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.162855Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.163108Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.163432Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.163521Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.164039Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.164458Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.164814Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.165373Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:25.165770Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.166250Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:25.166753Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.167938Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.168885Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.170887Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.177478Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:25.184026Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:25.185815Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:25.191695Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:25.193563Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:25.194900Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:25.200116Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:25.202570Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:25.265518Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.266555Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.271108Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:25.283331Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.283408Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.284394Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.285037Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.291753Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:25.292058Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:25.402739Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.403882Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.407624Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:25.920083Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.921228Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.924938Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:25.953842Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.954890Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.957977Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:26.069540Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.069640Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.070694Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.071081Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.075152Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:26.076024Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:26.135895Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.136893Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.140247Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:26.603010Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.603915Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.608104Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:26.669145Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.670211Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.674235Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:26.686879Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.687937Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.691552Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:26.721271Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.722515Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.726203Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:26.730682Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.731679Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.735595Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:26.765051Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.766084Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.769740Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:26.798822Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.799898Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.803481Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:26.864572Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.865658Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.869476Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:26.930398Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.931447Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.935845Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:27.247488Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.248617Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.252239Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:27.313401Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.314411Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.317747Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:27.429036Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.430011Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.434592Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:27.494890Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.495931Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.499344Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:28.061685Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.061785Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.062656Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.063245Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.067724Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:28.097587Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098620Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.100954Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:28.102218Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:28.102985Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103063Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103972Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.104419Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.107970Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:28.109070Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:28.169161Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.169241Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.169284Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.170303Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.170945Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.171493Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.177520Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:28.177980Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:28.178759Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:28.237941Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.238055Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.239164Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.239609Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.243549Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:28.244600Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:28.304663Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.305802Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.309477Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:28.370498Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.371484Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.375278Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:28.486562Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.487571Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.491198Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:28.552356Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.553555Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.557910Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:28.618778Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.619883Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.623552Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:28.624591Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.625408Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.628360Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:28.689659Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.689796Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.690819Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.691877Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.696929Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:28.698293Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:28.807538Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.807665Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.808739Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.809147Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.813016Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:28.814065Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:28.874204Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.874300Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.875426Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.876047Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.880244Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:28.881594Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:28.941009Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.941936Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.945696Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:29.057197Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.058220Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.061792Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:29.123011Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.123992Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.127335Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:29.188886Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.189828Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.193225Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:29.254491Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.255426Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.259137Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:29.320264Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.321247Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.325092Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:29.386130Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.387082Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.390524Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:29.452006Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.452993Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.456105Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:29.517353Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.517446Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.518317Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.519349Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.522983Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:29.524134Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:29.836694Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.837631Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.841421Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:30.052883Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.053797Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.057217Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:30.057719Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.058368Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.061796Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:30.090716Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.091037Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.091771Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.092080Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.097160Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:30.098185Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:30.129462Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.130185Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.133435Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:30.162388Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.163149Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.166127Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:30.227482Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.228306Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.231713Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:30.342905Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.343729Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.347332Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:30.508807Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.509673Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.513010Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:30.542340Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.543419Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.543748Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.546307Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.546948Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:30.549454Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:30.578815Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.579771Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.580116Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.582607Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.583179Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:30.585684Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:30.614989Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.615094Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.615730Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.616126Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.619818Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:30.621136Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:30.680892Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.681655Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.685320Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:31.147836Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.148650Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.152269Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:31.564633Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.565428Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.568658Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:31.629881Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.630499Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.634158Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:31.694921Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.695542Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.699076Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:31.760189Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.760771Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.763617Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:31.825270Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.825860Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.828768Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:31.890076Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.890651Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.893141Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:31.923797Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.924370Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.926902Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:31.988554Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.989130Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.991814Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:32.021369Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.021885Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.025536Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:32.054316Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.055253Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.055569Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.057481Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.058094Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:32.060225Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:32.089918Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.089984Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.093508Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.093879Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.096612Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:32.125799Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.127339Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.127746Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.130684Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:32.159985Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.625474Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.626002Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.629182Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:32.690385Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.155598Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.156095Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.158914Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:33.220191Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.485140Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.485624Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.488397Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:33.517696Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.537565Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.538126Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.541018Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:35.602312Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.602606Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.602743Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.603050Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.603310Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.608355Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:35.609730Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:35.610935Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:35.667805Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.667877Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.667901Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.668109Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.668626Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.671477Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:35.672624Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:35.702258Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.702331Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.702518Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.705114Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:35.734557Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:44.107410Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:58.232199Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:58.232199Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] 
[2026-06-08T17:36:58.232199Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:58.232281Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] 
[2026-06-08T17:36:58.232290Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:58.232296Z] [nf-0f38c348b68eccdbc2bea9cc80249b41-ccc1b-wwdnn] [598_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec