File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/36fe93b433f01c20ebae9d04cfb3db/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xqnh2xtz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:28,843 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:29,754 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:29,930 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:31,119 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:31,195 - cnv_pipe.batch.run_model - INFO - Processing cluster 1181 with 169 probes
2026-06-08 17:41:31,591 - cnv_pipe.batch.run_model.cluster1181 - INFO - Child process started for cluster 1181 with 169 probes
2026-06-08 17:42:24,500 - cnv_pipe.batch.run_model.cluster1181 - INFO - Child process finished cluster 1181. Wrote cluster_1181_samples.csv and cluster_1181_params.csv
2026-06-08 17:42:24,502 - cnv_pipe.batch.run_model - INFO - Cluster 1181 finished in 53.31 seconds. Status: SUCCESS