Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr10_74133927-74134264.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/defabb02dfa65e49948c3bd4e13f0f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr10_74133927-74134264.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/defabb02dfa65e49948c3bd4e13f0f/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:18.551652Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:18.567353Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:18.567387Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:18.567394Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:18.567398Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXEF6HGa'
[2026-06-08T17:36:18.567402Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:18.567408Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:18.567411Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:18.567415Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-08T17:36:18.567419Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:18.567422Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:18.567426Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:18.567430Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:18.567433Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:18.568402Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:18.568463Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:18.574189Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:18.574782Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:18.575046Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:18.575232Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:18.575438Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576172Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576264Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576335Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576450Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576582Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.576852Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.577111Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.577270Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.577498Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.577574Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.578043Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.578266Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.578593Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.578680Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.580557Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.580901Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:18.581228Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.581813Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.581891Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582090Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582159Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582273Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582342Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582452Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582515Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582636Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.582704Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583138Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583401Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583743Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583825Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583934Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.583994Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584104Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584187Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584302Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584364Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584474Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584536Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584648Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.584768Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.585328Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.585621Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.585735Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.585797Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.585907Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586026Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586151Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586223Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586334Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586402Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586508Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586566Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586672Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.586733Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587035Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587460Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587569Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587635Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587749Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587809Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587920Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.587980Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588112Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588177Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588283Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588341Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588447Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.588574Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.589210Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.589275Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.589378Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.589440Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.606284Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.606586Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.606663Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.606843Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.606911Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.607000Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.607065Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.607175Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.607245Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:18.607290Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:18.610040Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.610685Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.610931Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.613811Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:18.614081Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.614928Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-06-08T17:36:18.615058Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.615632Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.616557Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.619176Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-06-08T17:36:18.619611Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.620455Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.623578Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-06-08T17:36:18.626316Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:18.630760Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-06-08T17:36:18.632563Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-06-08T17:36:18.633914Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:18.741564Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.742350Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:18.746093Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:19.207987Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.208831Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.212039Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:19.423407Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.424212Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.427379Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:19.789323Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.790186Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.793776Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:20.205842Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.205945Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.206828Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.207551Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.212263Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-06-08T17:36:20.213449Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-06-08T17:36:20.272963Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.273836Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.277608Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-06-08T17:36:20.290172Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.290994Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.294293Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-06-08T17:36:20.355361Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.356319Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.359681Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-06-08T17:36:20.420823Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.421714Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.426360Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:20.637327Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.638232Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.641762Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:20.702744Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.703643Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.707412Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:20.768338Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769209Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773240Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:20.785849Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.786719Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.790299Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-06-08T17:36:20.795058Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795790Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.799357Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:20.811998Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.812794Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.816717Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-06-08T17:36:20.877647Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.878506Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.882167Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-06-08T17:36:21.294220Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.295078Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.298262Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-06-08T17:36:21.359501Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.360297Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.364581Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-06-08T17:36:21.675936Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.676818Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.680275Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-06-08T17:36:21.685138Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.685834Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.688947Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:21.751271Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.751353Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.751398Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.752090Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.752401Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.752616Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.757339Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-06-08T17:36:21.759127Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-06-08T17:36:21.760209Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-06-08T17:36:21.818122Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.818214Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.819054Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.819966Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.823439Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-06-08T17:36:21.825297Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-06-08T17:36:21.885820Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.885916Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.886774Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.887512Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.890705Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:21.893045Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-06-08T17:36:21.954892Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.954995Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.955025Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.955709Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.955957Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.957804Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.958829Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-06-08T17:36:21.962020Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:21.963064Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:22.023264Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.023364Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.023390Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.024049Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.024778Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.027052Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.027649Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:22.030694Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-06-08T17:36:22.031972Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-06-08T17:36:22.043754Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.044478Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.047652Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:22.048852Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.049402Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.052210Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-06-08T17:36:22.065701Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.066377Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.069299Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-06-08T17:36:22.098377Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.098469Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099083Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.099693Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.103270Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-06-08T17:36:22.104228Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-06-08T17:36:22.166786Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.166877Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.167494Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.167796Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.171606Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:22.173145Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-06-08T17:36:22.333060Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.333769Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.337945Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-06-08T17:36:22.398715Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.399415Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.402641Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-06-08T17:36:23.065532Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.066341Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.070263Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-06-08T17:36:23.181297Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.182002Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.185776Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:23.246816Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.246932Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.247533Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.249519Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.252426Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-06-08T17:36:23.253880Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-06-08T17:36:23.314716Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.314791Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.315374Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.315776Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.319087Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-06-08T17:36:23.320380Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:23.380137Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.380790Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.384155Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:23.445236Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.445845Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.448907Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-06-08T17:36:23.510188Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.510813Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.514802Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-06-08T17:36:23.575274Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.575842Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.579370Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-06-08T17:36:23.640435Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.641069Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.644501Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-06-08T17:36:23.673752Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.674335Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.677718Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:23.706510Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.707087Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.710604Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-06-08T17:36:23.711637Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.712107Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.715745Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-06-08T17:36:23.728255Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.728790Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.731927Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-06-08T17:36:23.761149Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.761720Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.765052Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-06-08T17:36:23.769796Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.801869Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.367530Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.368072Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.371525Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-06-08T17:36:24.432686Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.847885Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.848443Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.852005Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-06-08T17:36:24.912962Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.977200Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.977752Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.981492Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-06-08T17:36:25.042567Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.207159Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.207702Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.211141Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-06-08T17:36:25.272434Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.288445Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.288962Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.292156Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-06-08T17:36:25.353304Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.567848Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.568404Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.572315Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:25.633232Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.633569Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.633757Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.634755Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.637612Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.637979Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:25.641516Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:25.642712Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:25.672348Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.673889Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.673953Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.674176Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.676537Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.678907Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:25.680173Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:25.710456Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.711822Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.712061Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.715362Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:25.776507Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.147414Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:37.456210Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:37.456210Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] 
[2026-06-08T17:36:37.456210Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:37.456269Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] 
[2026-06-08T17:36:37.456282Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:37.456289Z] [nf-dfdefabb02dfa65e49948c3bd4e13f0f-6acb4-nxg55] [628_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec