File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/33512b955df64535df14661c54f7c9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-19q0tjpc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:07,004 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:07,922 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:08,098 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:09,290 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:09,397 - cnv_pipe.batch.run_model - INFO - Processing cluster 673 with 185 probes
2026-06-08 22:23:09,815 - cnv_pipe.batch.run_model.cluster673 - INFO - Child process started for cluster 673 with 185 probes
2026-06-08 22:24:08,843 - cnv_pipe.batch.run_model.cluster673 - INFO - Child process finished cluster 673. Wrote cluster_673_samples.csv and cluster_673_params.csv
2026-06-08 22:24:08,844 - cnv_pipe.batch.run_model - INFO - Cluster 673 finished in 59.45 seconds. Status: SUCCESS