File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/e8874519ec816a9f6a2b7ad77065b0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wqed0prx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:47,370 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:48,167 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:48,340 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:49,267 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:49,441 - cnv_pipe.batch.run_model - INFO - Processing cluster 1626 with 185 probes
2026-06-08 22:25:49,831 - cnv_pipe.batch.run_model.cluster1626 - INFO - Child process started for cluster 1626 with 185 probes
2026-06-08 22:26:43,721 - cnv_pipe.batch.run_model.cluster1626 - INFO - Child process finished cluster 1626. Wrote cluster_1626_samples.csv and cluster_1626_params.csv
2026-06-08 22:26:43,723 - cnv_pipe.batch.run_model - INFO - Cluster 1626 finished in 54.28 seconds. Status: SUCCESS