File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/891763f137c6620cdda8e053e74eef/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0yin8juh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:17,982 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:18,768 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:18,935 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:20,005 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:20,074 - cnv_pipe.batch.run_model - INFO - Processing cluster 1009 with 191 probes
2026-06-08 22:24:20,443 - cnv_pipe.batch.run_model.cluster1009 - INFO - Child process started for cluster 1009 with 191 probes
2026-06-08 22:25:16,597 - cnv_pipe.batch.run_model.cluster1009 - INFO - Child process finished cluster 1009. Wrote cluster_1009_samples.csv and cluster_1009_params.csv
2026-06-08 22:25:16,599 - cnv_pipe.batch.run_model - INFO - Cluster 1009 finished in 56.52 seconds. Status: SUCCESS