File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/138c560671060fa5d1a565d9152f00/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k373jn_7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:08,696 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:09,550 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:09,726 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:10,634 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:10,818 - cnv_pipe.batch.run_model - INFO - Processing cluster 1001 with 186 probes
2026-06-08 22:24:11,239 - cnv_pipe.batch.run_model.cluster1001 - INFO - Child process started for cluster 1001 with 186 probes
2026-06-08 22:25:05,886 - cnv_pipe.batch.run_model.cluster1001 - INFO - Child process finished cluster 1001. Wrote cluster_1001_samples.csv and cluster_1001_params.csv
2026-06-08 22:25:05,887 - cnv_pipe.batch.run_model - INFO - Cluster 1001 finished in 55.07 seconds. Status: SUCCESS