File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/23dd8b9178d953340bfb9df5a691fa/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ve_7rq8b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:48,598 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:49,445 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:49,624 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:50,690 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:50,854 - cnv_pipe.batch.run_model - INFO - Processing cluster 550 with 147 probes
2026-06-08 22:22:51,229 - cnv_pipe.batch.run_model.cluster550 - INFO - Child process started for cluster 550 with 147 probes
2026-06-08 22:23:39,068 - cnv_pipe.batch.run_model.cluster550 - INFO - Child process finished cluster 550. Wrote cluster_550_samples.csv and cluster_550_params.csv
2026-06-08 22:23:39,069 - cnv_pipe.batch.run_model - INFO - Cluster 550 finished in 48.21 seconds. Status: SUCCESS