File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/678a25bc94e7e689eeb693a1add4fd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l85mykfk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:05,585 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:06,363 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:06,530 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:07,419 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:07,581 - cnv_pipe.batch.run_model - INFO - Processing cluster 1369 with 186 probes
2026-06-08 22:25:07,950 - cnv_pipe.batch.run_model.cluster1369 - INFO - Child process started for cluster 1369 with 186 probes
2026-06-08 22:26:01,951 - cnv_pipe.batch.run_model.cluster1369 - INFO - Child process finished cluster 1369. Wrote cluster_1369_samples.csv and cluster_1369_params.csv
2026-06-08 22:26:01,952 - cnv_pipe.batch.run_model - INFO - Cluster 1369 finished in 54.37 seconds. Status: SUCCESS