File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/2bc194089506e013b2c7faf6da54e5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1t4bnz2n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:57,743 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:58,545 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:58,709 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:59,602 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:59,762 - cnv_pipe.batch.run_model - INFO - Processing cluster 1322 with 185 probes
2026-06-08 22:25:00,155 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process started for cluster 1322 with 185 probes
2026-06-08 22:25:53,818 - cnv_pipe.batch.run_model.cluster1322 - INFO - Child process finished cluster 1322. Wrote cluster_1322_samples.csv and cluster_1322_params.csv
2026-06-08 22:25:53,819 - cnv_pipe.batch.run_model - INFO - Cluster 1322 finished in 54.06 seconds. Status: SUCCESS