File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/9a59896ea086838ba7211248122b6d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1a22jl0a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:49,894 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:50,738 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:50,913 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:51,956 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:52,186 - cnv_pipe.batch.run_model - INFO - Processing cluster 830 with 164 probes
2026-06-08 22:23:52,579 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process started for cluster 830 with 164 probes
2026-06-08 22:24:41,831 - cnv_pipe.batch.run_model.cluster830 - INFO - Child process finished cluster 830. Wrote cluster_830_samples.csv and cluster_830_params.csv
2026-06-08 22:24:41,833 - cnv_pipe.batch.run_model - INFO - Cluster 830 finished in 49.65 seconds. Status: SUCCESS