#!/bin/bash -Ceuo pipefail
bcl-convert \
     \
    --tiles s_8 \
    --output-directory output \
    --bcl-input-directory rundir \
    --sample-sheet rundir/SampleSheet.csv

cat <<-END_VERSIONS > versions.yml
"DAQ:BCL_TO_FASTQ:BCLCONVERT":
    bclconvert: $(bcl-convert -V 2>&1 | head -n 1 | sed 's/^.*Version //')
END_VERSIONS