File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/2eab10313e373bedc4f22fc4cc332c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-96yhiht_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:06,234 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:07,094 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:07,263 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:08,233 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:08,406 - cnv_pipe.batch.run_model - INFO - Processing cluster 511 with 159 probes
2026-06-08 22:23:08,793 - cnv_pipe.batch.run_model.cluster511 - INFO - Child process started for cluster 511 with 159 probes
2026-06-08 22:23:58,463 - cnv_pipe.batch.run_model.cluster511 - INFO - Child process finished cluster 511. Wrote cluster_511_samples.csv and cluster_511_params.csv
2026-06-08 22:23:58,464 - cnv_pipe.batch.run_model - INFO - Cluster 511 finished in 50.06 seconds. Status: SUCCESS