File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/3fe89f9c31276e9d71e3b08ed82a71/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c8lrgicr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:09,816 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:10,635 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:10,809 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:11,758 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:11,928 - cnv_pipe.batch.run_model - INFO - Processing cluster 1392 with 195 probes
2026-06-08 22:25:12,319 - cnv_pipe.batch.run_model.cluster1392 - INFO - Child process started for cluster 1392 with 195 probes
2026-06-08 22:26:08,906 - cnv_pipe.batch.run_model.cluster1392 - INFO - Child process finished cluster 1392. Wrote cluster_1392_samples.csv and cluster_1392_params.csv
2026-06-08 22:26:08,907 - cnv_pipe.batch.run_model - INFO - Cluster 1392 finished in 56.98 seconds. Status: SUCCESS