File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/ddb4a4d40da9d2fc2697fb465ef271/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pnn70r6y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:47,406 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:48,218 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:48,388 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:49,345 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:49,512 - cnv_pipe.batch.run_model - INFO - Processing cluster 523 with 114 probes
2026-06-08 22:23:49,886 - cnv_pipe.batch.run_model.cluster523 - INFO - Child process started for cluster 523 with 114 probes
2026-06-08 22:24:25,222 - cnv_pipe.batch.run_model.cluster523 - INFO - Child process finished cluster 523. Wrote cluster_523_samples.csv and cluster_523_params.csv
2026-06-08 22:24:25,223 - cnv_pipe.batch.run_model - INFO - Cluster 523 finished in 35.71 seconds. Status: SUCCESS