cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo AlignmentStat HCC1395_BL.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_BL.sentieon.insert_size_metrics --algo QualDistribution HCC1395_BL.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_BL.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_BL.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.7s, peak mem 78MB, user 0.1s, sys 0.7s, output queue size 21
progress 10% @chr2:75000001, elapsed 0.1s, est remaining 0.6s, peak mem 78MB, user 0.2s, sys 1.6s, output queue size 3
progress 15% @chr2:235000001, elapsed 0.1s, est remaining 0.6s, peak mem 78MB, user 0.4s, sys 2.3s, output queue size 4
progress 20% @chr3:140000001, elapsed 0.1s, est remaining 0.5s, peak mem 78MB, user 0.5s, sys 3.2s, output queue size 13
progress 25% @chr4:116000001, elapsed 0.2s, est remaining 0.5s, peak mem 78MB, user 0.7s, sys 4.0s, output queue size 1
progress 30% @chr5:86000001, elapsed 0.2s, est remaining 0.5s, peak mem 78MB, user 0.9s, sys 4.8s, output queue size 6
progress 35% @chr6:64000001, elapsed 0.2s, est remaining 0.4s, peak mem 78MB, user 1.1s, sys 5.5s, output queue size 1
progress 40% @chr7:54000001, elapsed 0.3s, est remaining 0.4s, peak mem 78MB, user 1.3s, sys 6.2s, output queue size 3
progress 45% @chr8:57000001, elapsed 0.3s, est remaining 0.4s, peak mem 78MB, user 1.5s, sys 6.9s, output queue size 18
progress 50% @chr9:73000001, elapsed 0.3s, est remaining 0.3s, peak mem 78MB, user 1.7s, sys 7.8s, output queue size 5
progress 55% @chr10:96000001, elapsed 0.4s, est remaining 0.3s, peak mem 78MB, user 1.8s, sys 8.7s, output queue size 18
progress 60% @chr11:123000001, elapsed 0.4s, est remaining 0.3s, peak mem 78MB, user 1.9s, sys 9.5s, output queue size 3
progress 65% @chr13:17000001, elapsed 0.4s, est remaining 0.2s, peak mem 78MB, user 1.9s, sys 10.4s, output queue size 13
progress 70% @chr14:61000001, elapsed 0.5s, est remaining 0.2s, peak mem 78MB, user 2.1s, sys 11.1s, output queue size 3
progress 75% @chr16:14000001, elapsed 0.5s, est remaining 0.2s, peak mem 78MB, user 2.4s, sys 11.8s, output queue size 8
progress 80% @chr18:1, elapsed 0.5s, est remaining 0.1s, peak mem 78MB, user 2.7s, sys 12.5s, output queue size 5
progress 85% @chr20:22000001, elapsed 0.5s, est remaining 0.1s, peak mem 78MB, user 2.8s, sys 13.5s, output queue size 3
progress 90% @chrX:34000001, elapsed 0.6s, est remaining 0.1s, peak mem 93MB, user 3.7s, sys 14.0s, output queue size 114
progress 95% @chr21:45000001, elapsed 0.7s, est remaining 0.0s, peak mem 108MB, user 4.3s, sys 14.9s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.4s, est remaining 0.0s, peak mem 129MB, user 7.2s, sys 16.5s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 51395350
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.498 user 8.437 sys 10.402 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.006 user 0.001 sys 1.447 real
idle: 81 calls 0.019 user 0.013 sys 50.566 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 135364608 mem 7.452 user 17.146 sys 2.493 real