File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/619a25340b21e8063ec4087f4f3826/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5zilejnl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:32,804 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:33,694 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:33,869 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:34,926 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:34,998 - cnv_pipe.batch.run_model - INFO - Processing cluster 1177 with 158 probes
2026-06-08 22:24:35,377 - cnv_pipe.batch.run_model.cluster1177 - INFO - Child process started for cluster 1177 with 158 probes
2026-06-08 22:25:25,015 - cnv_pipe.batch.run_model.cluster1177 - INFO - Child process finished cluster 1177. Wrote cluster_1177_samples.csv and cluster_1177_params.csv
2026-06-08 22:25:25,016 - cnv_pipe.batch.run_model - INFO - Cluster 1177 finished in 50.02 seconds. Status: SUCCESS