Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/4ebf3baf8319364b7f8ba8fe3af40a/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/5e824146ba07eb6f65d51147020cd4/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/5e824146ba07eb6f65d51147020cd4/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/4ebf3baf8319364b7f8ba8fe3af40a/.command.run
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCPx2jz/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCPx2jz/chr4_22420786-22421189.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCPx2jz/chr4_22420786-22421189.bed.gz.tbi
[2026-06-08T22:19:26.263094Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:19:26.263903Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:19:26.263917Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:19:26.263921Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:19:26.263925Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCPx2jz'
[2026-06-08T22:19:26.263929Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:19:26.263934Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:19:26.263938Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:19:26.263941Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-08T22:19:26.263945Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:19:26.263949Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:19:26.263952Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:19:26.263956Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:19:26.263959Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:19:26.264630Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:19:26.264719Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:19:26.271050Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:19:26.271778Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:19:26.272078Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:19:26.272295Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:19:26.272544Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273014Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273106Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273180Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273343Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273420Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273539Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273607Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.273936Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.274299Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.274876Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.277068Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.277585Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.278199Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:19:26.278521Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.278847Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.279177Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.279803Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.280008Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.280087Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.280355Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.280639Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281110Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281343Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281462Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281525Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281642Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281709Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281819Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.281886Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282002Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282096Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282207Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282267Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282390Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282536Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.282986Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283052Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283165Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283392Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283519Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283581Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283693Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283756Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.283863Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.284006Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.284803Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.285036Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.285180Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.285254Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.285375Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.285654Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286341Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286448Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286576Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286641Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286766Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286832Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.286942Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.287016Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.287296Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.287740Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.287854Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.287921Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288029Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288099Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288212Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288275Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288384Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288450Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288557Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288624Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288736Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.288951Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.291008Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.291284Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.291866Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.291937Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292053Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292119Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292229Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292290Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292406Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292468Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292575Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292640Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292748Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292832Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.292984Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.293111Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.294504Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.294632Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.294765Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.294835Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.294951Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.295017Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.310366Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.310479Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.310550Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.310844Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.311699Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.311883Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.311952Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.312136Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.312208Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.312265Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:19:26.320912Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.321807Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.322142Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.322625Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.325370Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.326061Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T22:19:26.328683Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.329479Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T22:19:26.330488Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.331350Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.332379Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.335413Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:19:26.343704Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:19:26.346762Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:19:26.348794Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T22:19:26.349755Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T22:19:26.453627Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.454888Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.472956Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T22:19:26.693994Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T22:19:26.733971Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.735149Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.739664Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T22:19:27.602428Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.603638Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.608194Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:19:27.669722Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.671192Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.675157Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T22:19:27.937400Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.939114Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.942849Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.944318Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T22:19:27.945160Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.949036Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:19:28.160603Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.161935Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.166226Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:19:28.327838Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.329624Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.333954Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T22:19:28.695726Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.696859Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.701430Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T22:19:28.714073Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.715278Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.719077Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T22:19:28.780375Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.780484Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.781666Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.782418Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.787737Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T22:19:28.793102Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T22:19:28.852853Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.854407Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.858888Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T22:19:29.621558Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.622873Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.626967Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:19:29.630883Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.632150Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.635972Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:19:29.697043Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.697183Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.698593Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.699037Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.702969Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T22:19:29.703854Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T22:19:30.214807Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.216367Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.220582Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T22:19:30.281485Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.281590Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.283422Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.283919Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.287826Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T22:19:30.288922Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:19:30.350672Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.350773Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.352053Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.352684Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.357598Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T22:19:30.358939Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T22:19:30.518816Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.519977Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.524101Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T22:19:30.634688Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.635779Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.639597Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T22:19:30.702207Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.703411Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.707578Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T22:19:31.119796Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.120738Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.124386Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:19:31.185390Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.185506Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.186780Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.187741Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.191503Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T22:19:31.220364Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.221355Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.224944Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T22:19:31.226921Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T22:19:31.286037Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.286146Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.286180Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.287079Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.288160Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.290911Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.291502Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:19:31.295830Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T22:19:31.296939Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T22:19:31.324811Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.326121Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.329492Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T22:19:31.358422Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.359363Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.363148Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T22:19:31.367786Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.368586Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.372545Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T22:19:31.433704Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.434679Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.437970Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:19:31.502818Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.504283Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.508074Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T22:19:31.619148Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.620230Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.624044Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T22:19:31.835373Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.836354Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.840232Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T22:19:31.901449Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.902393Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.906235Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T22:19:32.218263Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.219479Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.223482Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T22:19:32.284814Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.285657Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.289284Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T22:19:32.551426Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.551514Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.552348Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.552720Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.556545Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T22:19:32.558055Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:19:32.619411Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.619495Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.620565Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.621243Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.625581Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T22:19:32.627021Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:19:32.686609Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.687822Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.691541Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T22:19:32.752570Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.753862Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.758130Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:19:32.819391Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.820198Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.824925Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T22:19:32.985643Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.987191Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.987720Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.989459Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.993053Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T22:19:32.994343Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:19:33.054139Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.055014Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.058452Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T22:19:33.119604Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.119715Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.120998Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.121476Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.126288Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T22:19:33.126599Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:19:33.186008Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.187067Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.191237Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T22:19:33.252175Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.253435Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.257278Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:19:33.318384Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.319495Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.323047Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T22:19:33.484623Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.485434Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.489981Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T22:19:33.550583Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.551631Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.556503Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:19:33.617111Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.618054Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.620933Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:19:33.682096Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.683819Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.684263Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.687264Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.689903Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:19:33.690924Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T22:19:33.752141Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.752261Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.753415Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.753868Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.759165Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:19:33.760270Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:19:33.770743Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.771613Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.774893Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:19:34.036400Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.037363Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.040451Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T22:19:34.101817Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.102534Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.106267Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T22:19:34.167322Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.168102Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.172160Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:19:34.232628Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.232709Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.233373Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.234210Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.238944Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T22:19:34.240018Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T22:19:34.301474Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.301593Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.302433Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.302895Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.307303Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T22:19:34.308287Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T22:19:34.367510Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.367621Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.368431Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.369003Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.373163Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T22:19:34.374499Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T22:19:34.434384Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.435268Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.439541Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:19:34.443899Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.444711Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.448319Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:19:34.477427Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.478256Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.482031Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:19:34.486508Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.487213Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.490873Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T22:19:34.519833Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.520460Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.524377Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:19:34.635487Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.635588Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.636151Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.636821Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.641536Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T22:19:34.643065Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:19:34.703892Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.703992Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.169113Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.169654Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.173298Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:19:35.234525Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.242623Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.243366Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.246546Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T22:19:35.275522Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.490285Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.490903Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.495198Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T22:19:35.556416Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.670768Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.671345Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.674586Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:19:35.735924Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.900634Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.901287Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.904608Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T22:19:35.965810Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.230521Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.231136Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.234286Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:19:36.297093Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.297423Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.297590Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.298724Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.301173Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.302229Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:19:36.306367Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:19:36.307583Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:19:36.335132Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.335228Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.335501Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.336645Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.340032Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:19:36.340654Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.341293Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:19:36.404717Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.404811Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.405045Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.408866Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:19:36.470096Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.885132Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:19:45.152670Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:19:45.152670Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] 
[2026-06-08T22:19:45.152670Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:19:45.152780Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] 
[2026-06-08T22:19:45.152787Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:19:45.152795Z] [nf-bc4ebf3baf8319364b7f8ba8fe3af40a-2de42-k7tvk] [614_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec