mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-us_g_pag because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:54,100 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:54,902 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:55,072 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:56,127 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:56,349 - cnv_pipe.batch.run_model - INFO - Processing cluster 539 with 191 probes
2026-06-08 22:22:56,721 - cnv_pipe.batch.run_model.cluster539 - INFO - Child process started for cluster 539 with 191 probes
2026-06-08 22:23:54,597 - cnv_pipe.batch.run_model.cluster539 - INFO - Child process finished cluster 539. Wrote cluster_539_samples.csv and cluster_539_params.csv
2026-06-08 22:23:54,599 - cnv_pipe.batch.run_model - INFO - Cluster 539 finished in 58.25 seconds. Status: SUCCESS