File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/eaec66d9ab08aa27e5bc3046ed0449/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ibe8dr9q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:10,336 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:11,210 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:11,390 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:12,345 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:12,545 - cnv_pipe.batch.run_model - INFO - Processing cluster 1394 with 199 probes
2026-06-08 22:25:12,940 - cnv_pipe.batch.run_model.cluster1394 - INFO - Child process started for cluster 1394 with 199 probes
2026-06-08 22:26:11,257 - cnv_pipe.batch.run_model.cluster1394 - INFO - Child process finished cluster 1394. Wrote cluster_1394_samples.csv and cluster_1394_params.csv
2026-06-08 22:26:11,258 - cnv_pipe.batch.run_model - INFO - Cluster 1394 finished in 58.71 seconds. Status: SUCCESS