File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/ac606f15e87abd8e26f0da6903c9d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-coelq3mr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:44,408 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:45,186 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:45,354 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:46,243 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:46,394 - cnv_pipe.batch.run_model - INFO - Processing cluster 1607 with 59 probes
2026-06-08 22:25:46,758 - cnv_pipe.batch.run_model.cluster1607 - INFO - Child process started for cluster 1607 with 59 probes
2026-06-08 22:26:07,739 - cnv_pipe.batch.run_model.cluster1607 - INFO - Child process finished cluster 1607. Wrote cluster_1607_samples.csv and cluster_1607_params.csv
2026-06-08 22:26:07,739 - cnv_pipe.batch.run_model - INFO - Cluster 1607 finished in 21.34 seconds. Status: SUCCESS