File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/c062167b3aca8b47a510f105504f67/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-700bz9pq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:33,625 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:34,476 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:34,645 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:35,604 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:35,805 - cnv_pipe.batch.run_model - INFO - Processing cluster 1542 with 191 probes
2026-06-08 22:25:36,209 - cnv_pipe.batch.run_model.cluster1542 - INFO - Child process started for cluster 1542 with 191 probes
2026-06-08 22:26:33,549 - cnv_pipe.batch.run_model.cluster1542 - INFO - Child process finished cluster 1542. Wrote cluster_1542_samples.csv and cluster_1542_params.csv
2026-06-08 22:26:33,550 - cnv_pipe.batch.run_model - INFO - Cluster 1542 finished in 57.74 seconds. Status: SUCCESS