File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/c96f82655efe739f5a09d8b15a79ed/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qez6fxvc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:33,494 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:34,278 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:34,449 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:35,321 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:35,386 - cnv_pipe.batch.run_model - INFO - Processing cluster 1189 with 195 probes
2026-06-08 22:24:35,841 - cnv_pipe.batch.run_model.cluster1189 - INFO - Child process started for cluster 1189 with 195 probes
2026-06-08 22:25:32,045 - cnv_pipe.batch.run_model.cluster1189 - INFO - Child process finished cluster 1189. Wrote cluster_1189_samples.csv and cluster_1189_params.csv
2026-06-08 22:25:32,047 - cnv_pipe.batch.run_model - INFO - Cluster 1189 finished in 56.66 seconds. Status: SUCCESS