File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/620e2da1440ea4419d183207f25d5c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o_zlkt0y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:01,855 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:02,709 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:02,896 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:03,952 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:04,147 - cnv_pipe.batch.run_model - INFO - Processing cluster 753 with 179 probes
2026-06-08 22:24:04,538 - cnv_pipe.batch.run_model.cluster753 - INFO - Child process started for cluster 753 with 179 probes
2026-06-08 22:24:58,587 - cnv_pipe.batch.run_model.cluster753 - INFO - Child process finished cluster 753. Wrote cluster_753_samples.csv and cluster_753_params.csv
2026-06-08 22:24:58,589 - cnv_pipe.batch.run_model - INFO - Cluster 753 finished in 54.44 seconds. Status: SUCCESS