File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/e5df4142c4dd85f3184839471d1a6c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o27dm0c5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:31,337 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:32,105 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:32,264 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:33,137 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:33,299 - cnv_pipe.batch.run_model - INFO - Processing cluster 773 with 154 probes
2026-06-08 22:23:33,660 - cnv_pipe.batch.run_model.cluster773 - INFO - Child process started for cluster 773 with 154 probes
2026-06-08 22:24:17,489 - cnv_pipe.batch.run_model.cluster773 - INFO - Child process finished cluster 773. Wrote cluster_773_samples.csv and cluster_773_params.csv
2026-06-08 22:24:17,490 - cnv_pipe.batch.run_model - INFO - Cluster 773 finished in 44.19 seconds. Status: SUCCESS