File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/b32227cd7ed20784b8efa97cd94591/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p38xmfci because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:49,828 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:50,621 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:50,788 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:51,736 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:51,930 - cnv_pipe.batch.run_model - INFO - Processing cluster 1281 with 176 probes
2026-06-08 22:24:52,313 - cnv_pipe.batch.run_model.cluster1281 - INFO - Child process started for cluster 1281 with 176 probes
2026-06-08 22:25:44,535 - cnv_pipe.batch.run_model.cluster1281 - INFO - Child process finished cluster 1281. Wrote cluster_1281_samples.csv and cluster_1281_params.csv
2026-06-08 22:25:44,536 - cnv_pipe.batch.run_model - INFO - Cluster 1281 finished in 52.61 seconds. Status: SUCCESS