File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/f5ae64781e4fe32bb5ff6193c53d53/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/d07b56a15966c2e38895ddfdbd0381/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/f5ae64781e4fe32bb5ff6193c53d53/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/7ed78ac42c69ab54b3e217334fb6eb/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/dd1165d1d800c83786359c65f3c192/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/795e9ecfc0e29ae0b2276eebff5db7/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/64439257744ddfe8aa12b7d4576c3e/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/2b5a43c7e53b772d8b372cb39759e3/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/9d3b6095b14323d77a7a48247c9ade/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/f5ae64781e4fe32bb5ff6193c53d53/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/ac0c64f0bad16e9b246ba1415ed54f/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory