File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/66ac64068db431d2f7801ca276c1f1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2csg7k8o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:56,736 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:57,513 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:57,680 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:58,570 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:58,638 - cnv_pipe.batch.run_model - INFO - Processing cluster 1318 with 183 probes
2026-06-08 22:24:59,112 - cnv_pipe.batch.run_model.cluster1318 - INFO - Child process started for cluster 1318 with 183 probes
2026-06-08 22:25:51,591 - cnv_pipe.batch.run_model.cluster1318 - INFO - Child process finished cluster 1318. Wrote cluster_1318_samples.csv and cluster_1318_params.csv
2026-06-08 22:25:51,592 - cnv_pipe.batch.run_model - INFO - Cluster 1318 finished in 52.95 seconds. Status: SUCCESS