mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nw50b6zr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:24,620 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:25,457 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:25,628 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:26,716 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:26,930 - cnv_pipe.batch.run_model - INFO - Processing cluster 4 with 179 probes
2026-06-08 22:21:27,313 - cnv_pipe.batch.run_model.cluster4 - INFO - Child process started for cluster 4 with 179 probes
2026-06-08 22:22:23,015 - cnv_pipe.batch.run_model.cluster4 - INFO - Child process finished cluster 4. Wrote cluster_4_samples.csv and cluster_4_params.csv
2026-06-08 22:22:23,016 - cnv_pipe.batch.run_model - INFO - Cluster 4 finished in 56.09 seconds. Status: SUCCESS