File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/e27807d2865eb9dc56e74826d6ad00/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x69e32l_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:47,847 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:48,646 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:48,818 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:49,723 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:49,901 - cnv_pipe.batch.run_model - INFO - Processing cluster 1272 with 163 probes
2026-06-08 22:24:50,279 - cnv_pipe.batch.run_model.cluster1272 - INFO - Child process started for cluster 1272 with 163 probes
2026-06-08 22:25:39,463 - cnv_pipe.batch.run_model.cluster1272 - INFO - Child process finished cluster 1272. Wrote cluster_1272_samples.csv and cluster_1272_params.csv
2026-06-08 22:25:39,464 - cnv_pipe.batch.run_model - INFO - Cluster 1272 finished in 49.56 seconds. Status: SUCCESS