File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/637ced388e4ea33dffca422e36222b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xn04ioos because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:39,560 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:40,423 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:40,593 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:41,529 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:41,687 - cnv_pipe.batch.run_model - INFO - Processing cluster 1219 with 196 probes
2026-06-08 22:24:42,069 - cnv_pipe.batch.run_model.cluster1219 - INFO - Child process started for cluster 1219 with 196 probes
2026-06-08 22:25:40,090 - cnv_pipe.batch.run_model.cluster1219 - INFO - Child process finished cluster 1219. Wrote cluster_1219_samples.csv and cluster_1219_params.csv
2026-06-08 22:25:40,091 - cnv_pipe.batch.run_model - INFO - Cluster 1219 finished in 58.40 seconds. Status: SUCCESS