File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/61c0aecd4685a7867c043785fef530/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dcny__cj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:00,319 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:01,128 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:01,295 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:02,168 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:02,234 - cnv_pipe.batch.run_model - INFO - Processing cluster 1338 with 194 probes
2026-06-08 22:25:02,698 - cnv_pipe.batch.run_model.cluster1338 - INFO - Child process started for cluster 1338 with 194 probes
2026-06-08 22:25:56,206 - cnv_pipe.batch.run_model.cluster1338 - INFO - Child process finished cluster 1338. Wrote cluster_1338_samples.csv and cluster_1338_params.csv
2026-06-08 22:25:56,207 - cnv_pipe.batch.run_model - INFO - Cluster 1338 finished in 53.97 seconds. Status: SUCCESS