File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/fb25a918b825fe76728268a7190669/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-777dimhi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:12,500 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:13,355 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:13,524 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:14,465 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:14,630 - cnv_pipe.batch.run_model - INFO - Processing cluster 1021 with 168 probes
2026-06-08 22:24:15,007 - cnv_pipe.batch.run_model.cluster1021 - INFO - Child process started for cluster 1021 with 168 probes
2026-06-08 22:25:06,041 - cnv_pipe.batch.run_model.cluster1021 - INFO - Child process finished cluster 1021. Wrote cluster_1021_samples.csv and cluster_1021_params.csv
2026-06-08 22:25:06,042 - cnv_pipe.batch.run_model - INFO - Cluster 1021 finished in 51.41 seconds. Status: SUCCESS